Eyediagram: Visualization probabilistic decompositions

The eyediagram visualization can be used to illustrate associations between entities, as found by probabilistic component models, such as topic models.

Publication

More information on the code can be found in the following publication:

Jose Caldas, Nils Gehlenborg, Ali Faisal, Alvis Brazma, and Samuel Kaski. Probabilistic retrieval and visualization of biologically relevant microarray experiments. Bioinformatics, 25:i145-i153, 2009. (ISMB/ECCB 2009). Publication web page

If you use the package, please cite the above paper.

Download

• Processing code with R interface: eyediagram.zip
• The code is maintained and developed in GitHub

Licence

Copyright (C) 2009-2013 Nils Gehlenborg (original author, nils@gehlenborg.com), Juuso Parkkinen (current developer, juuso.parkkinen@gmail.com), Jose Caldas, Ali Faisal, Alvis Brazma and Samuel Kaski. All rights reserved.

FreeBSD License

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.

2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.

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