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Targeted Retrieval of Gene Expression Measurements Using Regulatory Models


This method learns a regulatory model for a set of target genes and computes model-based similarities between measurement data.

When you use this method, please cite the following paper:

Elisabeth Georgii, Jarkko Salojärvi, Mikael Brosché, Jaakko Kangasjärvi, and Samuel Kaski. Targeted retrieval of gene expression measurements using regulatory models. Bioinformatics, 2012.

Source code

Download zip (source code for the above publication)

The code is written in R language.


Elisabeth Georgii, firstname.lastname@aalto.fi